Package: MassSpecWavelet 1.75.1

MassSpecWavelet: Peak Detection for Mass Spectrometry data using wavelet-based algorithms

Peak Detection in Mass Spectrometry data is one of the important preprocessing steps. The performance of peak detection affects subsequent processes, including protein identification, profile alignment and biomarker identification. Using Continuous Wavelet Transform (CWT), this package provides a reliable algorithm for peak detection that does not require any type of smoothing or previous baseline correction method, providing more consistent results for different spectra. See <doi:10.1093/bioinformatics/btl355} for further details.

Authors:Pan Du [aut], Warren Kibbe [aut], Simon Lin [aut], Sergio Oller Moreno [aut, cre]

MassSpecWavelet_1.75.1.tar.gz
MassSpecWavelet_1.75.1.zip(r-4.7)MassSpecWavelet_1.75.1.zip(r-4.6)MassSpecWavelet_1.75.1.zip(r-4.5)
MassSpecWavelet_1.75.1.tgz(r-4.6-x86_64)MassSpecWavelet_1.75.1.tgz(r-4.6-arm64)MassSpecWavelet_1.75.1.tgz(r-4.5-x86_64)MassSpecWavelet_1.75.1.tgz(r-4.5-arm64)
MassSpecWavelet_1.75.1.tar.gz(r-4.7-arm64)MassSpecWavelet_1.75.1.tar.gz(r-4.7-x86_64)MassSpecWavelet_1.75.1.tar.gz(r-4.6-arm64)MassSpecWavelet_1.75.1.tar.gz(r-4.6-x86_64)
MassSpecWavelet_1.75.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
MassSpecWavelet/json (API)
NEWS

# Install 'MassSpecWavelet' in R:
install.packages('MassSpecWavelet', repos = c('https://zeehio.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/zeehio/massspecwavelet/issues

Datasets:

On BioConductor:MassSpecWavelet-1.79.0(bioc 3.24)MassSpecWavelet-1.78.0(bioc 3.23)

immunooncologymassspectrometryproteomicspeakdetection

7.63 score 11 stars 21 packages 44 scripts 13 exports 0 dependencies

Last updated from:486cc2b7d0. Checks:13 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-arm64OK137
linux-devel-x86_64OK125
source / vignettesOK270
linux-release-arm64OK116
linux-release-x86_64OK120
macos-release-arm64OK106
macos-release-x86_64OK212
macos-oldrel-arm64OK78
macos-oldrel-x86_64OK227
windows-develOK91
windows-releaseOK88
windows-oldrelOK109
wasm-releaseOK91

Exports:cwtgetLocalMaximumCWTgetRidgegetRidgeLengthidentifyMajorPeakslocalMaximummexhpeakDetectionCWTplotLocalMaxplotPeakplotRidgeListprepareWaveletstuneInPeakInfo

Dependencies:

Finding local maxima with MassSpecWavelet

Sergio Oller

Rendered fromFindingLocalMaxima.Rmdusingknitr::rmarkdownon Jun 01 2026.

Last update: 2022-10-10
Started: 2022-10-06

Using the MassSpecWavelet package

Pan Du, Warren A. Kibbe, Simon Lin

Rendered fromMassSpecWavelet.Rmdusingknitr::rmarkdownon Jun 01 2026.

Last update: 2023-01-30
Started: 2022-04-04